STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpAPeptidoglycan glycosyltransferase, penicillin-binding protein A; Function of strongly homologous gene; enzyme. (498 aa)    
Predicted Functional Partners:
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Function of strongly homologous gene; cell process; Belongs to the SEDS family.
 
 0.998
ftsW
Cell division protein FtsW; Function of strongly homologous gene; cell process; Belongs to the SEDS family.
 0.990
CCH85500.1
Homologs of previously reported genes of unknown function.
 
   
 0.948
ftsI
Cell division protein FtsI/penicillin-binding protein 2; Function of strongly homologous gene; enzyme.
  
  
0.948
ftsQ
Membrane anchored protein involved in growth of wall at septum; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.909
CCH85501.1
Homologs of previously reported genes of unknown function.
 
   
 0.879
pstP
Serine/threonine protein phosphatase; Function of strongly homologous gene; enzyme.
  
 0.874
ponA
Membrane carboxypeptidase (Penicillin-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.854
pknA
Two component serine/threonine-protein kinase with PASTA sensors; Function of strongly homologous gene; enzyme.
  
  
 0.823
crgA
Conserved protein of unknown function; Involved in cell division; Belongs to the CrgA family.
   
 
 0.820
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.