STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85503.1Putative Aldose 1-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (306 aa)    
Predicted Functional Partners:
galK
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family.
  
 0.951
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.951
CCH87627.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.909
CCH88400.1
Glycoside hydrolase family 2 sugar binding; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.909
glcK
Glucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.906
ppgK
Polyphosphate glucokinase; Function of strongly homologous gene; enzyme.
    
 0.906
CCH85504.1
Homologs of previously reported genes of unknown function.
       0.778
CCH85505.1
Homologs of previously reported genes of unknown function.
       0.693
CCH85502.1
Homologs of previously reported genes of unknown function.
       0.528
galT
Galactose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.525
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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