STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85506.1Metal-dependent hydrolase; Function of strongly homologous gene; enzyme. (321 aa)    
Predicted Functional Partners:
CCH90235.1
Homologs of previously reported genes of unknown function.
  
     0.565
CCH85507.1
Homologs of previously reported genes of unknown function.
       0.535
CCH88856.1
Homologs of previously reported genes of unknown function.
  
     0.476
CCH86676.1
Subtilisin-like protease; Function of strongly homologous gene; enzyme; Belongs to the peptidase S8 family.
  
     0.468
CCH88784.1
Homologs of previously reported genes of unknown function.
  
     0.452
CCH87933.1
Putative Peptidase S8 and S53 subtilisin kexin sedolisin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.