STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85511.1Putative serine phosphatase with GAF(S) sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (375 aa)    
Predicted Functional Partners:
CCH85645.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
 
     0.681
CCH85512.1
Zn-dependent hydrolase; Function of strongly homologous gene; enzyme.
       0.506
CCH85554.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
 
 
 0.483
CCH86787.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.460
CCH86877.1
Bacteriophytochrome (Light-regulated signal transduction histidine kinase); Function of strongly homologous gene; enzyme.
   
 0.432
CCH89099.1
Two-component PAS/PAC sensor protein; Function of strongly homologous gene; regulator.
 
 
 0.414
CCH89209.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.414
CCH90899.1
Putative PAS/PAC light sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.