STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iniAIsoniazid-inductible GTPase (dynamin-related); Function of strongly homologous gene; cell process. (505 aa)    
Predicted Functional Partners:
CCH85520.1
Homologs of previously reported genes of unknown function.
 
     0.960
CCH85519.1
Homologs of previously reported genes of unknown function.
 
     0.874
CCH85517.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Function of strongly homologous gene; regulator.
 
     0.838
CCH85518.1
Putative heat shock protein Hsp70; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.825
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Function of strongly homologous gene; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.695
cmk
Cytidylate kinase; Function of strongly homologous gene; enzyme.
  
  
 0.562
dnaG
DNA primase; Function of strongly homologous gene; enzyme.
  
    0.541
dnaG-3
DNA primase; Function of strongly homologous gene; enzyme.
  
    0.541
dnaG-4
DNA primase; Function of strongly homologous gene; enzyme.
  
    0.541
CCH89344.1
Homologs of previously reported genes of unknown function.
  
     0.536
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.