STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85523.1Homologs of previously reported genes of unknown function. (299 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase); Catalyzes the synthesis of GMP from XMP.
     
  0.638
CCH85524.1
Homologs of previously reported genes of unknown function.
    
  0.558
CCH85522.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.517
CCH86676.1
Subtilisin-like protease; Function of strongly homologous gene; enzyme; Belongs to the peptidase S8 family.
 
 
 0.488
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
 
  
  0.486
CCH87178.1
ComEC/Rec2-related protein (modular protein); Function of strongly homologous gene; cell process.
  
  
 0.481
CCH89276.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.419
CCH87451.1
Homologs of previously reported genes of unknown function.
  
    0.407
CCH88327.1
Homologs of previously reported genes of unknown function.
  
  
  0.404
CCH88529.1
Homologs of previously reported genes of unknown function.
 
    0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.