STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efeUFerrous iron permease efeU; Function of strongly homologous gene; transporter. (297 aa)    
Predicted Functional Partners:
efeO
Ferrous iron transport binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.998
CCH85529.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.953
CCH87546.1
Dyp-type peroxidase; Function of strongly homologous gene; enzyme.
  
  
 0.599
fecE
Iron-dicitrate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
   
  
 0.548
fecE-2
Iron-dicitrate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
   
  
 0.548
CCH85525.1
Putative secreted metal-dependent cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.523
fadD
Long chain acyl-CoA synthetase (AMP-forming); Function of strongly homologous gene; enzyme.
       0.523
CCH89890.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
  
 0.479
CCH90744.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; Function of strongly homologous gene; enzyme.
   
    0.437
CCH85530.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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