STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85529.1Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (425 aa)    
Predicted Functional Partners:
efeO
Ferrous iron transport binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.993
efeU
Ferrous iron permease efeU; Function of strongly homologous gene; transporter.
 
  
 0.953
CCH87103.1
Putative Ferrous iron permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.914
copC
Copper resistance protein; Function of strongly homologous gene; transporter.
  
  
 0.864
copC-2
Copper resistance protein CopC; Function of strongly homologous gene; transporter.
 
  
 0.776
CCH85530.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.648
pheA
Prephenate dehydratase; Function of strongly homologous gene; enzyme.
     
 0.584
gto2
Glutathione S-transferase; Function of strongly homologous gene; enzyme.
      
 0.481
CCH86208.1
Homologs of previously reported genes of unknown function.
  
    0.458
CCH88450.1
Homologs of previously reported genes of unknown function.
  
    0.458
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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