STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85545.1Homologs of previously reported genes of unknown function. (229 aa)    
Predicted Functional Partners:
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.654
CCH90037.1
Homologs of previously reported genes of unknown function.
  
     0.645
CCH90100.1
Function of strongly homologous gene; enzyme.
  
   
 0.626
CCH90089.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.620
CCH86205.1
Conserved exported protein of unknown function, putative Enoyl-CoA hydratase domain; Homologs of previously reported genes of unknown function.
 
     0.570
aidB
Isovaleryl CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.554
CCH90949.1
Homologs of previously reported genes of unknown function.
  
 
 
 0.552
CCH90149.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
    0.543
nnrE
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
       0.528
CCH87711.1
Membrane protein of unknown function; No homology to any previously reported sequences.
 
   
 0.526
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.