STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85558.1HMP/thiamine permease; Function of strongly homologous gene; transporter. (255 aa)    
Predicted Functional Partners:
CCH85559.1
HMP/thiamine import ATP-binding protein; Function of strongly homologous gene; transporter.
 0.998
CCH86984.1
ABC-type cobalt transport system, ATPase component; Function of strongly homologous gene; enzyme.
 0.985
cbiO
Membrane associated cobalt transport protein CbiO, ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.974
CCH85560.1
HMP/thiamine permease; Function of strongly homologous gene; transporter.
 
  
 0.950
CCH86985.1
ABC transporter; Function of strongly homologous gene; transporter.
  
 0.947
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.761
cbiN
Cobalt transport protein cbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.687
CCH86022.1
Glutathione import ATP-binding protein gsiA; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
  
 0.667
CCH88191.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
  
 0.667
CCH88397.1
Oligopeptide transporter subunit; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
  
 0.667
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.