STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85559.1HMP/thiamine import ATP-binding protein; Function of strongly homologous gene; transporter. (448 aa)    
Predicted Functional Partners:
CCH85558.1
HMP/thiamine permease; Function of strongly homologous gene; transporter.
 0.998
CCH85560.1
HMP/thiamine permease; Function of strongly homologous gene; transporter.
 
  
 0.936
CCH87620.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
CCH88173.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein (modular protein); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
CCH88192.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
CCH88396.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter.
  
 0.880
CCH89595.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
cbiO
Membrane associated cobalt transport protein CbiO, ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
0.859
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Function of strongly homologous gene; transporter.
  
 0.834
CCH86984.1
ABC-type cobalt transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
0.734
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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