STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85567.1GCN5-related N-acetyltransferase; Function of strongly homologous gene; enzyme. (204 aa)    
Predicted Functional Partners:
clpP
ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp); Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
       0.556
CCH85569.1
Zn-dependent hydrolase of the beta-lactamase fold-like protein; Function of strongly homologous gene; enzyme.
 
     0.533
CCH88948.1
Putative metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.464
mntH
Manganese transport protein mntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
       0.463
CCH85545.1
Homologs of previously reported genes of unknown function.
  
     0.445
CCH86097.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.438
CCH86442.1
Homologs of previously reported genes of unknown function.
  
    0.433
CCH88007.1
Homologs of previously reported genes of unknown function.
  
     0.413
CCH85504.1
Homologs of previously reported genes of unknown function.
  
     0.411
CCH89766.1
Homologs of previously reported genes of unknown function.
  
     0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.