Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acdS1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD); Function of strongly homologous gene; enzyme. (340 aa)    
Predicted Functional Partners:
CCH85575.1
Transcriptional regulator, GntR family; Function of strongly homologous gene; regulator.
 
     0.858
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
     
  0.751
CCH89006.1
Putative thiosulfate sulfurtransferase sseB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.637
cysA-2
Thiosulfate sulfurtransferase; Function of strongly homologous gene; enzyme.
    
 0.637
CCH85682.1
Cysteine-S-conjugate beta-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
    
  0.635
CCH85574.1
Thiosulfate:cyanide sulfurtransferase (rhodanese); Function of strongly homologous gene; enzyme.
 
 
 0.633
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
     
  0.621
asp
Aspartate aminotransferase; Function of strongly homologous gene; enzyme.
     
  0.621
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.621
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.621
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.