STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85590.1Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (183 aa)    
Predicted Functional Partners:
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.757
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.728
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
  0.685
CCH85592.1
Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator.
  
    0.561
CCH85591.1
Putative nucleoside-diphosphate-sugar epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.560
strM
dTDP-4-dehydrorhamnose 3,5-epimerase; Function of strongly homologous gene; enzyme.
  
 
 0.552
birA
biotin-(Acetyl-CoA-carboxylase) ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.511
rfbB-2
dTDP-D-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.486
sixA
Phosphohistidine phosphatase, SixA; Function of strongly homologous gene; enzyme.
     
 0.485
CCH85938.1
Lipopolysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
  
  
 0.438
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.