STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThioredoxin; Function of strongly homologous gene; carrier; Belongs to the thioredoxin family. (118 aa)    
Predicted Functional Partners:
trxB-2
Thioredoxin reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.875
trxB-3
Thioredoxin reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.874
trxB
Two component thioredoxin reductase carring response regulator; Function of strongly homologous gene; enzyme.
 
 
 0.789
CCH89434.1
Thioredoxin reductase (NADPH); Function of strongly homologous gene; enzyme.
 
 
 0.775
CCH85602.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
  
    0.774
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH]; Function of strongly homologous gene; enzyme.
   
 
 0.677
clpB
Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.660
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.636
fabG-2
3-oxoacyl-[acyl-carrier-protein] reductase; Function of strongly homologous gene; enzyme.
   
 
 0.636
fabG-3
3-oxoacyl-[acyl-carrier-protein] reductase; Function of strongly homologous gene; enzyme.
   
 
 0.636
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.