STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFUrease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (215 aa)    
Predicted Functional Partners:
ureD
Urease accessory protein; Function of strongly homologous gene; enzyme.
 
 
 0.999
ureC
Urease alpha subunit (Urea amidohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.998
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 0.997
ureB
Urease beta subunit (modular protein); Function of strongly homologous gene; enzyme.
 
 
 0.988
ureA
Urease subunit gamma; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease gamma subunit family.
 
 
 0.983
ureG-2
Urease accessory protein UreG (modular protein); Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 0.978
allB
Allantoinase; Function of strongly homologous gene; enzyme.
       0.718
CCH85592.1
Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator.
      
 0.605
CCH85659.1
Transcriptional regulator, PadR-like family; Function of strongly homologous gene; regulator.
       0.530
nicT
High-affinity nickel transport protein; Function of strongly homologous gene; transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
  
 0.440
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.