STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ureDUrease accessory protein; Function of strongly homologous gene; enzyme. (237 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.996
ureB
Urease beta subunit (modular protein); Function of strongly homologous gene; enzyme.
  
 
 0.986
ureA
Urease subunit gamma; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease gamma subunit family.
  
 
 0.983
ureC
Urease alpha subunit (Urea amidohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.968
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.940
allB
Allantoinase; Function of strongly homologous gene; enzyme.
       0.773
ureG-2
Urease accessory protein UreG (modular protein); Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 
 0.695
CCH90524.1
Homologs of previously reported genes of unknown function.
  
     0.652
CCH86724.1
Homologs of previously reported genes of unknown function.
  
     0.627
CCH88007.1
Homologs of previously reported genes of unknown function.
  
     0.580
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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