STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85685.1Putative Haloacid dehalogenase, type II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (227 aa)    
Predicted Functional Partners:
CCH89399.1
Putative (S)-2-haloacid dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.917
dehH
Haloacetate dehalogenase H-1; Function of strongly homologous gene; enzyme.
 
 
  0.913
CCH90737.1
Haloacid dehalogenase superfamily enzyme, subfamily IA; Function of strongly homologous gene; enzyme.
    
 0.907
CCH88351.1
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
  0.900
ald-2
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
  0.900
CCH85684.1
Homologs of previously reported genes of unknown function.
       0.536
CCH88850.1
CAAX amino terminal protease; Function of strongly homologous gene; enzyme.
 
     0.421
CCH85625.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.409
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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