STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85687.1ABC transporter permease protein; Function of strongly homologous gene; transporter. (816 aa)    
Predicted Functional Partners:
CCH85688.1
Transporter subunit: ATP-binding component of ABC superfamily; Function of strongly homologous gene; enzyme.
 
 0.992
CCH86302.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.897
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Function of strongly homologous gene; enzyme.
 
 
 0.882
CCH86301.1
Transporter subunit: ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter.
 
 
 0.882
CCH90833.1
Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.871
CCH85690.1
Two component integral membrane signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
   
 0.635
CCH87178.1
ComEC/Rec2-related protein (modular protein); Function of strongly homologous gene; cell process.
       0.497
CCH85686.1
Zn-dependent hydrolase; Function of strongly homologous gene; enzyme.
       0.488
pheT
Phenylalanyl-tRNA synthetase beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.482
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
       0.443
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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