STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85694.1Rieske (2Fe-2S) iron-sulphur domain Ferredoxin; Function of strongly homologous gene; carrier. (432 aa)    
Predicted Functional Partners:
CCH85693.1
Universal stress protein; Function of strongly homologous gene; cell process.
       0.631
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
  
 0.627
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.571
CCH88850.1
CAAX amino terminal protease; Function of strongly homologous gene; enzyme.
  
     0.524
CCH85695.1
Homologs of previously reported genes of unknown function.
       0.516
CCH85696.1
Sodium solute symporter; Function of strongly homologous gene; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.516
CCH90562.1
Putative DNA methylase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.512
paaE
Phenylacetic acid degradation NADH oxidoreductase; Function of strongly homologous gene; enzyme.
  
  
 0.494
CCH87299.1
Homologs of previously reported genes of unknown function.
  
     0.471
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.470
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.