Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH85700.1Two component signal transducing histidine kinase; Function of strongly homologous gene; enzyme. (238 aa)    
Predicted Functional Partners:
CCH85554.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
  
 0.711
CCH85780.1
Serine phosphatase RsbU, regulator of sigma subunit (modular protein); Function of strongly homologous gene; enzyme.
  
 0.711
CCH88547.1
Two component sensory transduction histidine kinase with PAS/PAC sensory domains (fragment); Function of strongly homologous gene; enzyme.
  
 0.711
CCH89654.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.711
CCH90899.1
Putative PAS/PAC light sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 0.711
sucA
2-oxoglutarate decarboxylase; Function of strongly homologous gene; enzyme.
  
 0.693
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.674
CCH86877.1
Bacteriophytochrome (Light-regulated signal transduction histidine kinase); Function of strongly homologous gene; enzyme.
  
 0.636
CCH85701.1
Two component regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Function of strongly homologous gene; regulator.
   
  0.615
CCH87488.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
   
 0.598
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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