STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85705.1Homologs of previously reported genes of unknown function. (489 aa)    
Predicted Functional Partners:
CCH85706.1
Homologs of previously reported genes of unknown function.
 
  
 0.982
CCH85704.1
Homologs of previously reported genes of unknown function.
  
    0.776
glpE
Rhodanese-related sulfurtransferase; Function of strongly homologous gene; enzyme.
       0.558
CCH87226.1
Homologs of previously reported genes of unknown function.
 
    0.470
CCH86511.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.465
CCH88706.1
Homologs of previously reported genes of unknown function.
  
     0.464
CCH90949.1
Homologs of previously reported genes of unknown function.
  
     0.456
CCH88850.1
CAAX amino terminal protease; Function of strongly homologous gene; enzyme.
  
     0.446
CCH90074.1
Putative phospho-glucose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.440
CCH90524.1
Homologs of previously reported genes of unknown function.
  
     0.429
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.