STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylHXylose transport system permease protein araH; Function of strongly homologous gene; enzyme; Belongs to the binding-protein-dependent transport system permease family. (423 aa)    
Predicted Functional Partners:
xylF
Multiple monosaccharide-binding extracellular receptor; Function of strongly homologous gene; receptor.
 
 0.996
xylG
Xylose transport ATP-binding protein; Function of strongly homologous gene; enzyme.
 
 0.986
rbsB
ABC transporter; Function of strongly homologous gene; transporter.
 
 0.963
CCH86357.1
Sugar uptake ABC transporter solute-binding protein; Function of strongly homologous gene; transporter.
 
 0.933
CCH90499.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Function of strongly homologous gene; transporter.
 
 0.840
rbsA-5
ABC ribose transport ATP binding protein; Function of strongly homologous gene; transporter.
 
 0.827
CCH86356.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.808
rbsA-4
Ribose import ATP-binding protein rbsA; Function of strongly homologous gene; enzyme.
 
 0.808
rbsA
ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport); Function of strongly homologous gene; transporter.
 
 0.793
rbsA-3
ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport); Function of strongly homologous gene; transporter.
 
 0.789
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.