STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85726.1FAD linked oxidase; Function of strongly homologous gene; enzyme. (568 aa)    
Predicted Functional Partners:
CCH88043.1
Diacylglycerol kinase; Function of strongly homologous gene; enzyme.
   0.893
glpD
Glycerol-3-phosphate dehydrogenase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.825
CCH85725.1
Anti-anti-sigma regulatory factor; Function of strongly homologous gene; factor.
       0.664
CCH89666.1
Homologs of previously reported genes of unknown function.
      0.653
CCH86943.1
Putative FAD/FMN-containing dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.487
CCH85728.1
Homologs of previously reported genes of unknown function.
       0.484
CCH86933.1
FAD/FMN-dependent dehydrogenase; Function of strongly homologous gene; enzyme.
 
     0.479
CCH85729.1
Methyltransferase type 11; Function of strongly homologous gene; enzyme.
       0.416
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.407
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.