Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH85730.1Homologs of previously reported genes of unknown function. (143 aa)    
Predicted Functional Partners:
CCH85731.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
       0.773
tipA
HTH-type transcriptional activator tipA; Function of strongly homologous gene; regulator.
       0.519
priA-2
Phosphoribosyl isomerase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.468
CCH90664.1
Putative abortive infection protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.468
hisE
Phosphoribosyl-ATP pyrophosphatase; Function of strongly homologous gene; enzyme; Belongs to the PRA-PH family.
    
  0.463
CCH86415.1
Conserved secreted protein of unknown function, putative PKD domains; Homologs of previously reported genes of unknown function.
  
     0.410
cobB-2
Sir2-family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
    
   0.406
CCH87142.1
Homologs of previously reported genes of unknown function.
    
   0.406
CCH88518.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
   0.406
CCH88519.1
Homologs of previously reported genes of unknown function.
    
   0.406
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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