STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85792.1Putative PE-PGRS family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (589 aa)    
Predicted Functional Partners:
CCH85577.1
Homologs of previously reported genes of unknown function.
  
     0.722
CCH87150.1
Homologs of previously reported genes of unknown function.
  
     0.572
CCH86669.1
Homologs of previously reported genes of unknown function.
  
     0.530
CCH85557.1
Homologs of previously reported genes of unknown function.
  
     0.515
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.505
CCH87590.1
Amino acid-binding transporter; Function of strongly homologous gene; transporter.
  
     0.498
CCH90067.1
Lipoprotein LpqB, beta-propeller domain-like protein; Function of strongly homologous gene; cell process.
  
     0.492
CCH90037.1
Homologs of previously reported genes of unknown function.
  
   
 0.487
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.472
CCH86461.1
Protein of unknown function; No homology to any previously reported sequences.
 
 
   0.469
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.