STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85815.1Homologs of previously reported genes of unknown function. (130 aa)    
Predicted Functional Partners:
CCH85816.1
Homologs of previously reported genes of unknown function.
 
     0.665
CCH88029.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.562
CCH90560.1
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.558
CCH85814.1
Putative Riboflavin biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.531
CCH89101.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.494
CCH86653.1
DNA alkylation repair enzyme; Function of strongly homologous gene; enzyme.
 
     0.433
CCH89098.1
Transcriptional regulator, MarR family; Function of strongly homologous gene; factor.
  
     0.425
CCH86455.1
Transcriptional regulator, PadR family; Function of strongly homologous gene; regulator.
 
     0.413
CCH87887.1
acetyl-CoA carboxylase, biotin carboxylase subunit; Function of strongly homologous gene; enzyme.
  
     0.400
CCH90877.1
Cytochrome c domain-containing protein; Homologs of previously reported genes of unknown function.
  
     0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.