STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85822.1Geranylgeranyl reductase; Function of strongly homologous gene; enzyme. (371 aa)    
Predicted Functional Partners:
CCH85823.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.723
CCH85824.1
Homologs of previously reported genes of unknown function; Belongs to the LOG family.
       0.631
etfB
Electron transfer flavoprotein subunit beta; Function of strongly homologous gene; carrier.
  
 
 0.631
CCH90581.1
Naringenin-chalcone synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.596
CCH89732.1
Anti-sigma factor; Function of strongly homologous gene; factor.
   
  
 0.544
crtB
Phytoene synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.521
CCH85828.1
3-oxoacyl-[acyl-carrier-protein] reductase; Function of strongly homologous gene; enzyme.
  
   0.519
CCH85825.1
Enoyl-CoA hydratase; Function of strongly homologous gene; enzyme.
     
 0.498
fcs
Feruloyl-CoA synthetase; Function of strongly homologous gene; enzyme.
  
  
 0.492
CCH85827.1
Putative Amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.484
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.