STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85830.1Phenylacetic acid-responsive transcriptional repressor; Function of strongly homologous gene; regulator. (282 aa)    
Predicted Functional Partners:
CCH85834.1
Branched-chain amino acid ABC transporter substrate-binding protein; Function of strongly homologous gene; transporter.
 
     0.713
CCH85831.1
High-affinity branched-chain amino acid ABC transporter, ATP binding protein (modular protein); Function of strongly homologous gene; enzyme.
       0.543
CCH85832.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.543
CCH85833.1
Branched-chain amino acid ABC transport permease; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.543
CCH85835.1
Fatty-acyl-CoA synthase; Function of strongly homologous gene; enzyme.
       0.543
CCH85836.1
Homologs of previously reported genes of unknown function.
       0.543
paaD
Phenylacetic acid degradation protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.450
CCH86094.1
Putative thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.437
CCH86879.1
Transcriptional regulator, PucR family; Function of strongly homologous gene; regulator.
  
    0.418
CCH90706.1
Homologs of previously reported genes of unknown function.
  
  
 0.418
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.