STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85836.1Homologs of previously reported genes of unknown function. (250 aa)    
Predicted Functional Partners:
CCH85834.1
Branched-chain amino acid ABC transporter substrate-binding protein; Function of strongly homologous gene; transporter.
 
     0.817
CCH85831.1
High-affinity branched-chain amino acid ABC transporter, ATP binding protein (modular protein); Function of strongly homologous gene; enzyme.
       0.773
CCH85832.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.773
CCH85833.1
Branched-chain amino acid ABC transport permease; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.773
CCH85835.1
Fatty-acyl-CoA synthase; Function of strongly homologous gene; enzyme.
       0.773
CCH90773.1
Homologs of previously reported genes of unknown function.
  
     0.600
CCH86287.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
     0.593
CCH85830.1
Phenylacetic acid-responsive transcriptional repressor; Function of strongly homologous gene; regulator.
       0.543
CCH90864.1
Fatty acid desaturase; Function of strongly homologous gene; enzyme.
 
     0.457
CCH89641.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.454
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.