STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85843.1Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme. (264 aa)    
Predicted Functional Partners:
CCH86553.1
Homologs of previously reported genes of unknown function.
 
     0.681
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.539
CCH85845.1
Homologs of previously reported genes of unknown function.
       0.510
pgsA
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme.
 
     0.501
CCH85557.1
Homologs of previously reported genes of unknown function.
  
     0.447
CCH85677.1
Lipoprotein; Function of strongly homologous gene; lipoprotein.
 
     0.434
CCH86188.1
Osmoprotectant transport system substrate-binding protein; Function of strongly homologous gene; transporter.
  
    0.421
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.415
CCH85554.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
 
    0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.