Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH85845.1 | CCH85846.1 | MODMU_0387 | MODMU_0388 | Homologs of previously reported genes of unknown function. | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | 0.584 |
CCH85845.1 | menB | MODMU_0387 | MODMU_0386 | Homologs of previously reported genes of unknown function. | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.727 |
CCH85846.1 | CCH85845.1 | MODMU_0388 | MODMU_0387 | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | Homologs of previously reported genes of unknown function. | 0.584 |
CCH85846.1 | CCH89013.1 | MODMU_0388 | MODMU_3603 | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | Homologs of previously reported genes of unknown function. | 0.451 |
CCH85846.1 | CCH89256.1 | MODMU_0388 | MODMU_3852 | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator. | 0.738 |
CCH85846.1 | menB | MODMU_0388 | MODMU_0386 | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.551 |
CCH89013.1 | CCH85846.1 | MODMU_3603 | MODMU_0388 | Homologs of previously reported genes of unknown function. | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | 0.451 |
CCH89256.1 | CCH85846.1 | MODMU_3852 | MODMU_0388 | Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator. | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | 0.738 |
menB | CCH85845.1 | MODMU_0386 | MODMU_0387 | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | Homologs of previously reported genes of unknown function. | 0.727 |
menB | CCH85846.1 | MODMU_0386 | MODMU_0388 | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | Transcriptional regulator, tetR family; Function of strongly homologous gene; regulator. | 0.551 |