STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CCH85851.1Putative signal-transducer protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (167 aa)    
Predicted Functional Partners:
CCH86306.1
Diguanylate kinase; Function of strongly homologous gene; enzyme.
 
 0.816
CCH87562.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor.
 
 0.815
CCH88668.1
Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
  0.754
CCH90323.1
Diguanylate cyclase (GGDEF) domain-containing protein; Function of strongly homologous gene; enzyme.
 
 
  0.752
CCH86169.1
Diguanylate cyclase (GGDEF); Function of strongly homologous gene; enzyme.
 
 
  0.724
CCH87759.1
Diguanylate cyclase with PAS/PAC sensor (fragment); Function of strongly homologous gene; receptor.
 
 0.722
CCH88306.1
Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.717
CCH89238.1
Diguanylate cyclase with PAS/PAC sensor; Function of strongly homologous gene; enzyme.
 
 0.687
CCH85735.1
Diguanylate kinase; Function of strongly homologous gene; enzyme.
 
 
 0.670
CCH85734.1
Diguanylate cyclase with PAS/PAC sensor (fragment); Function of strongly homologous gene; enzyme.
 
 
  0.653
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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