STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85855.1Homologs of previously reported genes of unknown function. (708 aa)    
Predicted Functional Partners:
CCH85856.1
Homologs of previously reported genes of unknown function.
     0.967
CCH85857.1
Zn-dependent hydrolase of the beta-lactamase fold-like protein; Function of strongly homologous gene; enzyme.
 
     0.925
CCH85858.1
Mixed type I polyketide synthase-non ribosomal peptide synthetase; Function of strongly homologous gene; enzyme.
       0.512
CCH87150.1
Homologs of previously reported genes of unknown function.
  
     0.497
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
  
  0.482
CCH87299.1
Homologs of previously reported genes of unknown function.
 
     0.481
CCH86568.1
FAD dependent oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.475
CCH88956.1
Homologs of previously reported genes of unknown function.
  
     0.441
CCH88908.1
Homologs of previously reported genes of unknown function.
  
     0.435
CCH90037.1
Homologs of previously reported genes of unknown function.
  
   
 0.430
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.