STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcaJUndecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme. (533 aa)    
Predicted Functional Partners:
CCH88118.1
Non-specific protein-tyrosine kinase; Function of strongly homologous gene; enzyme.
 
  
 0.915
CCH85938.1
Lipopolysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
 
  
 0.911
CCH85916.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CCH85915.1
Polysaccharide biosynthesis protein; Function of strongly homologous gene; cell process.
 
  
 0.765
CCH86418.1
Capsular exopolysaccharide family; Function of strongly homologous gene; enzyme.
 
  
 0.731
CCH85913.1
Putative O-antigen polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.674
CCH85912.1
Putative polysaccharide acetyltransferase protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.668
rkpK
UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme.
     
 0.667
CCH88119.1
dTDP-glucose 4,6-dehydratase, polysaccharide biosynthesis protein CapD; Function of strongly homologous gene; enzyme.
  
 0.651
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.639
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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