STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85928.1ABC transporter; Function of strongly homologous gene; transporter. (570 aa)    
Predicted Functional Partners:
cydD
Fused cysteine transporter subunits of ABC superfamily: membrane component; Function of strongly homologous gene; enzyme.
  
 
  0.670
cbiO
Membrane associated cobalt transport protein CbiO, ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
  
 
0.650
dnaK
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.567
CCH85927.1
Protein of unknown function; No homology to any previously reported sequences.
       0.547
ftsE
Cell division ATP-binding protein FtsE transporter subunit; Part of the ABC transporter FtsEX involved in cellular division.
 
    
0.509
CCH85518.1
Putative heat shock protein Hsp70; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 0.464
CCH85929.1
Protein of unknown function; No homology to any previously reported sequences.
       0.458
CCH85930.1
Protein of unknown function; No homology to any previously reported sequences.
       0.458
rpsE
30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
 
 0.450
moeB
Molybdopterin-synthase sulfurylase; Function of strongly homologous gene; enzyme.
 
 
 0.446
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.