Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85940.1Glycosyl transferase family 8; Function of strongly homologous gene; enzyme. (316 aa)    
Predicted Functional Partners:
CCH85941.1
Glycosyl transferase, group 1; Function of strongly homologous gene; enzyme.
 
 
 0.665
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.571
CCH90008.1
Putative ubiquinone chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 
 0.567
CCH86535.1
ADP-heptose:LPS heptosyltransferase (fragment) (modular protein); Function of strongly homologous gene; enzyme.
 
 
 0.509
CCH85913.1
Putative O-antigen polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.506
CCH86416.1
Homologs of previously reported genes of unknown function.
  
 
 0.506
CCH86417.1
Homologs of previously reported genes of unknown function.
  
 
 0.506
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
       0.504
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.464
CCH85981.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.428
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.