STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85969.1Putative glycerophosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (476 aa)    
Predicted Functional Partners:
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.746
CCH85970.1
Homologs of previously reported genes of unknown function.
       0.584
CCH90524.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.550
CCH85491.1
Homologs of previously reported genes of unknown function.
  
     0.510
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.489
CCH86190.1
Protein of unknown function; No homology to any previously reported sequences.
  
   
 0.488
CCH87284.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
 
 
 
 0.474
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.461
CCH85971.1
MFS permease; Function of strongly homologous gene; transporter.
       0.425
rplF
50S ribosomal subunit protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
   
  0.425
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.