STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85979.1Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator. (167 aa)    
Predicted Functional Partners:
CCH85978.1
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.700
CCH85980.1
Putative D,D-heptose 1,7-bisphosphate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.538
gmhA
Phosphoheptose isomerase; Function of strongly homologous gene; enzyme.
     
 0.420
CCH86717.1
Transcriptional regulator, MarR family (fragment); Function of strongly homologous gene; regulator.
  
     0.417
CCH85981.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
       0.415
CCH85982.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
       0.415
lldD
Lactate 2-monooxygenase; Function of strongly homologous gene; enzyme.
       0.407
CCH85983.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
       0.406
hldE
Bifunctional protein hldE [Includes: D-beta-D-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
       0.406
CCH85986.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
       0.406
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.