Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH85987.1Protein of unknown function; No homology to any previously reported sequences. (315 aa)    
Predicted Functional Partners:
CCH85876.1
Putative Lipopolysaccharide biosynthesis translocase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.701
CCH86818.1
Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme.
 
 0.554
CCH85872.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
 
 0.552
CCH85884.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
 
 0.495
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.471
CCH87877.1
Homologs of previously reported genes of unknown function.
  
     0.469
CCH85988.1
Homologs of previously reported genes of unknown function.
       0.433
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.