STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH85997.1Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (400 aa)    
Predicted Functional Partners:
CCH85992.1
Extracellular amino acid-binding receptor; Function of strongly homologous gene; transporter.
 
     0.632
CCH87736.1
Membrane protein of unknown function, putative kinase domain; No homology to any previously reported sequences.
  
     0.619
bra
ABC-type branched-chain amino acid transport system, substrate-binding; Function of strongly homologous gene; transporter.
 
     0.583
CCH85995.1
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.542
CCH85996.1
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.542
CCH85723.1
Transcriptional regulator, putative ATPase, winged helix family; Function of strongly homologous gene; regulator.
  
    0.520
CCH88706.1
Homologs of previously reported genes of unknown function.
 
     0.514
CCH85994.1
Branched-chain amino acid ABC-type transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.478
CCH85993.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.477
CCH89394.1
Homologs of previously reported genes of unknown function.
  
     0.472
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.