STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86005.1Conserved protein of unknown function with LGFP domains; No homology to any previously reported sequences. (710 aa)    
Predicted Functional Partners:
CCH88857.1
Cell-division initiation protein; Function of strongly homologous gene; cell process.
   
    0.597
CCH90158.1
Homologs of previously reported genes of unknown function.
  
     0.586
CCH90464.1
Hemerythrin HHE cation binding domain protein; Function of strongly homologous gene; carrier.
  
     0.498
CCH90089.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
     0.454
CCH90105.1
Putative Short-chain dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.424
CCH85545.1
Homologs of previously reported genes of unknown function.
  
    0.420
CCH85770.1
Homologs of previously reported genes of unknown function.
  
     0.416
CCH90078.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.410
CCH86811.1
Homologs of previously reported genes of unknown function.
  
     0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.