STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86026.1Glycosyl hydrolase family 88; Function of strongly homologous gene; enzyme. (313 aa)    
Predicted Functional Partners:
bglB
Thermostable beta-glucosidase B; Function of strongly homologous gene; enzyme.
     
 0.786
CCH86027.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
  
    0.776
CCH86025.1
Conserved protein of unknown function, putative cupin and pirin domains; Homologs of previously reported genes of unknown function; Belongs to the pirin family.
       0.675
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.669
CCH86029.1
ABC sugar transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
     
 0.554
CCH87625.1
Beta-xylosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.528
CCH88171.1
Homologs of previously reported genes of unknown function.
 
    0.524
CCH88186.1
Beta-xylosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.493
CCH86023.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
       0.483
CCH86024.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; enzyme.
       0.483
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.