STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86030.1Sugar transport integral membrane protein; Function of strongly homologous gene; transporter. (300 aa)    
Predicted Functional Partners:
CCH86031.1
Sugar transport systems inner membrane protein; Function of strongly homologous gene; transporter.
 0.999
CCH86029.1
ABC sugar transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 0.995
CCH86032.1
Extracellular solute-binding protein, family 1; Function of strongly homologous gene; transporter.
 
 0.991
ugpC
Glycerol-3-phosphate ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 0.989
ugpC-2
Sugar-binding transport ATP-binding protein; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
 0.988
CCH89719.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Function of strongly homologous gene; transporter.
 
 0.965
CCH88577.1
Substrate-binding ABC permease; Function of strongly homologous gene; transporter.
 
 0.963
CCH88578.1
Extracellular sugar-binding lipoprotein; Function of strongly homologous gene; transporter.
 
 
 0.871
CCH89720.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; Function of strongly homologous gene; transporter.
 
 
 0.813
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
   
  
 0.581
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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