Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86035.1Homologs of previously reported genes of unknown function. (316 aa)    
Predicted Functional Partners:
CCH86036.1
Putative transglutaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.995
CCH86034.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    0.992
CCH86318.1
Homologs of previously reported genes of unknown function.
    0.954
CCH86922.1
Transglutaminase domain protein; Function of strongly homologous gene; enzyme.
 
  
 0.842
CCH87178.1
ComEC/Rec2-related protein (modular protein); Function of strongly homologous gene; cell process.
       0.572
celR
HTH-type transcriptional regulator celR; Function of strongly homologous gene; regulator.
       0.495
CCH88879.1
Transglutaminase; Function of strongly homologous gene; enzyme.
 
  
 0.449
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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