STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86053.1Homologs of previously reported genes of unknown function. (57 aa)    
Predicted Functional Partners:
CCH86054.1
Endoribonuclease L-PSP (protein synthesis inhibitor); Function of strongly homologous gene; enzyme.
  
    0.809
CCH86612.1
Homologs of previously reported genes of unknown function.
  
     0.773
CCH86051.1
Oxyanion-translocating ATPase; Function of strongly homologous gene; transporter.
       0.666
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
       0.666
CCH86055.1
NUDIX hydrolase; Function of strongly homologous gene; enzyme.
       0.632
ponA
Membrane carboxypeptidase (Penicillin-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.533
CCH88618.1
Homologs of previously reported genes of unknown function.
  
     0.468
lgt-2
Prolipoprotein diacylglyceryl transferase (modular protein); Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
     0.458
CCH86048.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
 
     0.451
CCH86131.1
Septum site determining protein; Function of strongly homologous gene; cell process.
  
     0.451
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.