STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86054.1Endoribonuclease L-PSP (protein synthesis inhibitor); Function of strongly homologous gene; enzyme. (156 aa)    
Predicted Functional Partners:
CCH86053.1
Homologs of previously reported genes of unknown function.
  
    0.806
CCH86051.1
Oxyanion-translocating ATPase; Function of strongly homologous gene; transporter.
       0.598
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
       0.598
CCH86055.1
NUDIX hydrolase; Function of strongly homologous gene; enzyme.
  
    0.575
pab
Para-aminobenzoate synthase; Function of strongly homologous gene; enzyme.
    
 0.534
ponA
Membrane carboxypeptidase (Penicillin-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.435
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.