STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86055.1NUDIX hydrolase; Function of strongly homologous gene; enzyme. (268 aa)    
Predicted Functional Partners:
CCH90496.1
Zn-dependent hydrolase, glyoxylase; Function of strongly homologous gene; enzyme.
     0.967
CCH86051.1
Oxyanion-translocating ATPase; Function of strongly homologous gene; transporter.
 
     0.678
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
 
     0.639
CCH86053.1
Homologs of previously reported genes of unknown function.
       0.632
CCH86054.1
Endoribonuclease L-PSP (protein synthesis inhibitor); Function of strongly homologous gene; enzyme.
  
    0.579
CCH86002.1
Epoxide hydrolase N-terminal domain-like phosphatase; Function of strongly homologous gene; enzyme.
 
   0.574
CCH86550.1
Lipolytic G-D-S-L Esterase; Function of strongly homologous gene; enzyme.
  
     0.484
CCH90398.1
Homologs of previously reported genes of unknown function.
  
    0.470
CCH87690.1
Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the CoA-transferase III family.
  
    0.445
CCH89477.1
Putative Flavin-containing monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.416
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.