STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH86072.1ABC-type multidrug transport system, permease component; Function of strongly homologous gene; transporter. (284 aa)    
Predicted Functional Partners:
CCH86073.1
ABC transporter, ATPase component; Function of strongly homologous gene; transporter.
 
 
  0.958
CCH86071.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
 
   
 0.938
CCH90189.1
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
 
  0.591
CCH86520.1
ABC transporter, ATPase; Function of strongly homologous gene; enzyme.
 
 
  0.584
CCH88835.1
Nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.514
hflX
Putative GTP-binding transporter; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.497
CCH90653.1
Homologs of previously reported genes of unknown function.
  
     0.496
CCH87762.1
Putative secreted hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.476
cysG
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
       0.430
cobB
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
    0.425
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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