STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86073.1ABC transporter, ATPase component; Function of strongly homologous gene; transporter. (291 aa)    
Predicted Functional Partners:
CCH86072.1
ABC-type multidrug transport system, permease component; Function of strongly homologous gene; transporter.
  
 0.958
CCH86071.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
 
     0.918
MODMU_2354
Fragment of putative modular protein: ATP-binding protein (ABC transporter component)(N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
0.853
CCH90188.1
ABC-type multidrug transport system, permease component; Function of strongly homologous gene; transporter.
  
 0.758
CCH86521.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
  
 0.756
cbiO
Membrane associated cobalt transport protein CbiO, ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
0.542
CCH86457.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
 
    0.529
hflX
Putative GTP-binding transporter; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.497
CCH87592.1
Amino acid ABC transporter membrane protein (fragment).
      0.475
CCH88806.1
ABC-type branched-chain amino acid transport systems, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
    
0.464
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.